Citation

Please cite our software if you use PolarityJam in your research!

The Article is available https://doi.org/10.1101/2024.01.24.577027.

We additionally have a citation.cff here. (Or see the repository polarityjam “Cite this repository”).

Thank you.

If you used the segmentation module, please also cite based on your algorithm of choice:

Cellpose: https://www.nature.com/articles/s41592-020-01018-x

Mesmer Deepcell: https://www.nature.com/articles/s41587-021-01094-0

microSam: https://arxiv.org/abs/2304.02643 and https://www.biorxiv.org/content/10.1101/2023.08.21.554208v1

Note

Citing Polarity-JaM without citing the segmentation algorithm that was used is not recommended, as the segmentation module is a critical part of the workflow.